RNAJunction Database - Junction Profile:1090

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1090: 1I97_j2_A-A442_A-U464

Primary Citation: (from PDB entry 1I97)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2UUA j2 A-A448 A-U480 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 133°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.30659Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUGACGGUA 9nt

Strand 2: Chain A: GACGAAA 7nt

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