RNAJunction Database - Junction Profile:12435

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12435: 2OTJ_j3_0-C2552_0-C2575_0-A2596

Primary Citation: (from PDB entry 2OTJ)

G.BLAHA S.J.SCHROEDER J.TIRADO-RIVES THE STRUCTURES OF ANTIBIOTICS BOUND TO THE E SITE REGION OF THE 50 S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI: 13-DEOXYTEDANOLIDE AND GIRODAZOLE. J.MOL.BIOL. V. 367 1471 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1YIJ j3 0-C2552 0-C2575 0-A2596 
NC-IUBMB Classification:Cluster Page
Angles: 17:139:155°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.67621Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGCAAGGGUGAG 12nt

Strand 2: Chain 0: UCCAUCCUGCC 11nt

Strand 3: Chain 0: CUAUUAAAGGA 11nt

Valid XHTML 1.0 Transitional