RNAJunction Database - Junction Profile:2500

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2500: 1KC8_j3_A-C2552_A-C2575_A-A2596

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1YIJ j3 0-C2552 0-C2575 0-A2596 
NC-IUBMB Classification:Cluster Page
Angles: 17:138:155°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.68201Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCAAGGGUGAG 12nt

Strand 2: Chain A: UCCAUCCUGCC 11nt

Strand 3: Chain A: CUAUUAAAGGA 11nt

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