RNAJunction Database - Junction Profile:2519
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2519: 1KC8_j4_A-U27_A-G448_A-A476_A-G503

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1VQL j4 0-U27 0-G448 0-A476 0-G503 
NC-IUBMB Classification:Cluster Page
Angles: 9:73:78:80:88:139°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.63031Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAGACCGAUAGUGAACAAGUAG 22nt

Strand 2: Chain A: AUUGCUCGGCUC 12nt

Strand 3: Chain A: CGAACGCUGCAAAGUACC 18nt

Strand 4: Chain A: GAGGCGAAAUAGAGCAUG 18nt

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