RNAJunction Database - Junction Profile:2616
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2616: 1KD1_j3_A-C2552_A-C2575_A-A2596

Primary Citation: (from PDB entry 1KD1)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1YIJ j3 0-C2552 0-C2575 0-A2596 
NC-IUBMB Classification:Cluster Page
Angles: 17:139:156°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.62723Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCAAGGGUGAG 12nt

Strand 2: Chain A: UCCAUCCUGCC 11nt

Strand 3: Chain A: CUAUUAAAGGA 11nt

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