RNAJunction Database - Junction Profile:2620

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2620: 1KD1_j3_A-G1160_A-U1185_A-U1205

Primary Citation: (from PDB entry 1KD1)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1K8A j3 A-G1160 A-U1185 A-U1205 
NC-IUBMB Classification:Cluster Page
Angles: 18:148:166°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.07795Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCUCUAAGAAAAGC 14nt

Strand 2: Chain A: GGGAGG 6nt

Strand 3: Chain A: GCUUACC 7nt

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