RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2643: 1KD1_j7_A-A912_A-G928_A-U1041_A-C1069_A-A1086_A-C1267_A-A1286

Primary Citation: (from PDB entry 1KD1)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images

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Derived Information

Type:	7-way	Cluster:	1KC8 j7 A-A912 A-G928 A-U1041 A-C1069 A-A1086 A-C1267 A-A1286
NC-IUBMB Classification:			Cluster Page
Angles:	30:39:40:42:60:63:63:76:92:103:103:105:118:124:132:132:135:142:143:156:165°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.62416Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AUGACC 6nt

Strand 2: Chain A: CGAAACAU 8nt

Strand 3: Chain A: GAUUCCGGU 9nt

Strand 4: Chain A: ACCAGGAGG 9nt

Strand 5: Chain A: CCAGAGAU 8nt

Strand 6: Chain A: GUCCGUAC 8nt

Strand 7: Chain A: GUAAUCGAGUAG 12nt