RNAJunction Database - Junction Profile:6748
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6748: 1VQ6_j7_0-A912_0-G928_0-U1041_0-C1069_0-A1086_0-C1267_0-A1286

Primary Citation: (from PDB entry 1VQ6)

T.M.SCHMEING T.A.STEITZ AN INDUCED-FIT MECHANISM TO PROMOTE PEPTIDE BOND FORMATION AND EXCLUDE HYDROLYSIS OF PEPTIDYL-TRNA NATURE V. 438 520 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:7-wayCluster:1KC8 j7 A-A912 A-G928 A-U1041 A-C1069 A-A1086 A-C1267 A-A1286 
NC-IUBMB Classification:Cluster Page
Angles: 30:40:41:41:63:65:67:76:91:101:102:106:118:124:129:130:136:143:143:156:166°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.59407Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AUGACC 6nt

Strand 2: Chain 0: CGAAACAU 8nt

Strand 3: Chain 0: GAUUCCGGU 9nt

Strand 4: Chain 0: ACCAGGAGG 9nt

Strand 5: Chain 0: CCAGAGAU 8nt

Strand 6: Chain 0: GUCCGUAC 8nt

Strand 7: Chain 0: GUAAUCGAGUAG 12nt

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