#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS12HS2
FINGERPRINT = 32:36:135:142:159:168
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 7
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 7
S1_NAME2_ID5 =  5
S1_NAME2_ID3 = 6
S1_NUM2_ID5_ORIG =  5
S1_NUM2_ID3_ORIG = 6
S1_SQ2 = CC
S1_SQLEN2 = 2
S1_SQ = CCCU
S1_SQLEN = 4
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  8
S2_NAME_ID3 = 13
S2_NUM_ID5_ORIG =  8
S2_NUM_ID3_ORIG = 13
S2_NAME2_ID5 =  9
S2_NAME2_ID3 = 12
S2_NUM2_ID5_ORIG =  9
S2_NUM2_ID3_ORIG = 12
S2_SQ2 = GGAG
S2_SQLEN2 = 4
S2_SQ = GGGAGG
S2_SQLEN = 6
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  26
S3_NAME_ID3 = 29
S3_NUM_ID5_ORIG =  26
S3_NUM_ID3_ORIG = 29
S3_NAME2_ID5 =  27
S3_NAME2_ID3 = 28
S3_NUM2_ID5_ORIG =  27
S3_NUM2_ID3_ORIG = 28
S3_SQ2 = GA
S3_SQLEN2 = 2
S3_SQ = AGAC
S3_SQLEN = 4
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  20
S4_NAME_ID3 = 24
S4_NUM_ID5_ORIG =  20
S4_NUM_ID3_ORIG = 24
S4_NAME2_ID5 =  21
S4_NAME2_ID3 = 23
S4_NUM2_ID5_ORIG =  21
S4_NUM2_ID3_ORIG = 23
S4_SQ2 = UUC
S4_SQLEN2 = 3
S4_SQ = GUUCC
S4_SQLEN = 5
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 5
H1_OUTID2_ORIG = 12
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 3.0363944920869765
H1_P_Y = 2.4208433167255685
H1_P_Z = -20.631051657253483
# Orientation:
H1_DX_X = -0.6012827582437805
H1_DX_Y = 0.6276354002836118
H1_DX_Z = 0.49450262784901255
H1_DY_X = 0.7433599674133431
H1_DY_Y = 0.6663624175527532
H1_DY_Z = 0.058112712210697026
H1_DZ_X = -0.2930443711897306
H1_DZ_Y = 0.40253562921073227
H1_DZ_Z = -0.8672312631183985
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 27
H2_OUTID2_ORIG = 6
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 2.7934249735422525
H2_P_Y = 0.3839888071112596
H2_P_Z = -3.4839119772164855
# Orientation:
H2_DX_X = 0.9554041380735749
H2_DX_Y = -0.2696648982244324
H2_DX_Z = -0.1203485588509361
H2_DY_X = -0.23727953003213598
H2_DY_Y = -0.9436409906493234
H2_DY_Z = 0.23073817498214844
H2_DZ_X = -0.17578781977036773
H2_DZ_Y = -0.19189195770529444
H2_DZ_Z = -0.9655444676390674
## Properties of helix 3
H3_INID = 1
H3_OUTID = 4
H3_INID2 = 2
H3_OUTID2 = 3
H3_INID2_ORIG = 21
H3_OUTID2_ORIG = 28
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 5.470763951997091
H3_P_Y = 0.45060191639400804
H3_P_Z = 11.249660974187735
# Orientation:
H3_DX_X = 0.8372474119310205
H3_DX_Y = 0.1213008217442425
H3_DX_Z = -0.5332006018929274
H3_DY_X = -0.27959593520588566
H3_DY_Y = 0.9329487072625207
H3_DY_Z = -0.22678805663777624
H3_DZ_X = 0.4699392346156621
H3_DZ_Y = 0.3389584344154365
H3_DZ_Z = 0.815024107316761
## Properties of helix 4
H4_INID = 1
H4_OUTID = 5
H4_INID2 = 2
H4_OUTID2 = 4
H4_INID2_ORIG = 9
H4_OUTID2_ORIG = 23
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 5.065792500924322
H4_P_Y = 1.8202768137955636
H4_P_Z = -3.402236536239221
# Orientation:
H4_DX_X = -0.948421940392695
H4_DX_Y = -0.3159546575551815
H4_DX_Z = 0.025854928948714218
H4_DY_X = 0.31608718174521666
H4_DY_Y = -0.9362872830375308
H4_DY_Z = 0.1531503090384252
H4_DZ_X = -0.02418091226818575
H4_DZ_Y = 0.15342352489558642
H4_DZ_Z = 0.9878646190093514
#############  END of Description of junction: j1