############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 161 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 14 S1_NAME_ID3 = 21 S1_NUM_ID5_ORIG = 14 S1_NUM_ID3_ORIG = 21 S1_NAME2_ID5 = 16 S1_NAME2_ID3 = 19 S1_NUM2_ID5_ORIG = 16 S1_NUM2_ID3_ORIG = 19 S1_SQ2 = GAAG S1_SQLEN2 = 4 S1_SQ = GUGAAGUC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 28 S2_NAME_ID3 = 34 S2_NUM_ID5_ORIG = 28 S2_NUM_ID3_ORIG = 34 S2_NAME2_ID5 = 30 S2_NAME2_ID3 = 32 S2_NUM2_ID5_ORIG = 30 S2_NUM2_ID3_ORIG = 32 S2_SQ2 = CAC S2_SQLEN2 = 3 S2_SQ = GUCACAC S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 16 H1_OUTID2_ORIG = 32 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 2.090961599342277 H1_P_Y = -2.207937815946601 H1_P_Z = 12.085276428807978 # Orientation: H1_DX_X = -0.1063655281694329 H1_DX_Y = 0.2695656751018749 H1_DX_Z = -0.9570897143027448 H1_DY_X = -0.5659721911120221 H1_DY_Y = -0.8078206045128029 H1_DY_Z = -0.16462487604377074 H1_DZ_X = -0.8175340074303294 H1_DZ_Y = 0.5241757508044804 H1_DZ_Z = 0.23849094105115398 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 30 H2_OUTID2_ORIG = 19 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = 20.442502339366513 H2_P_Y = -12.083605065436554 H2_P_Z = 9.397198671351195 # Orientation: H2_DX_X = 0.3129375851027447 H2_DX_Y = 0.7521914787504329 H2_DX_Z = 0.579894858681552 H2_DY_X = -0.30524387372969386 H2_DY_Y = -0.4985184990107996 H2_DY_Z = 0.811360267510377 H2_DZ_X = 0.8993865939519843 H2_DZ_Y = -0.430914475782906 H2_DZ_Z = 0.07359666555076316 ############# END of Description of junction: j2