#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 10:73:78:78:87:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 46.01379911971945
H1_P_Y = 126.67570148437326
H1_P_Z = 37.30272374835016
# Orientation:
H1_DX_X = -0.17340818650214374
H1_DX_Y = -0.9348528093888291
H1_DX_Z = 0.30980610973938383
H1_DY_X = -0.5772799188435656
H1_DY_Y = -0.15837976063434667
H1_DY_Z = -0.8010391667835961
H1_DZ_X = 0.7979207330017175
H1_DZ_Y = -0.31775159511673223
H1_DZ_Z = -0.5122074068644196
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.732392384382166
H2_P_Y = 143.70523410005885
H2_P_Z = 56.53046535127619
# Orientation:
H2_DX_X = -0.6479443261607187
H2_DX_Y = 0.42684971585362064
H2_DX_Z = 0.6308466297538828
H2_DY_X = 0.24781510321652434
H2_DY_Y = -0.6650244480622121
H2_DY_Z = 0.7045070319715236
H2_DZ_X = 0.7202470581779039
H2_DZ_Y = 0.6128146567725423
H2_DZ_Z = 0.32511901148786393
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.665237060901983
H3_P_Y = 171.21997688948164
H3_P_Z = 66.31540268348759
# Orientation:
H3_DX_X = -0.7257363511141968
H3_DX_Y = 0.6744275650839882
H3_DX_Z = -0.13584626651594078
H3_DY_X = -0.3481067516857266
H3_DY_Y = -0.18966857014538618
H3_DY_Z = 0.9180672758190553
H3_DZ_X = 0.5934041102842613
H3_DZ_Y = 0.7135637973957785
H3_DZ_Z = 0.372422164947082
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 28.0426817171522
H4_P_Y = 141.39482466957455
H4_P_Z = 69.52711282499158
# Orientation:
H4_DX_X = -0.7493353034453101
H4_DX_Y = -0.6513943185890128
H4_DX_Z = -0.11908839036816232
H4_DY_X = 0.6091320663807522
H4_DY_Y = -0.748591495648185
H4_DY_Z = 0.26185663701716066
H4_DZ_X = -0.259720481897844
H4_DZ_Y = 0.12367786525149427
H4_DZ_Z = 0.9577312028589091
#############  END of Description of junction: j1