############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 142 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.47276959102902 H1_P_Y = 128.65133436264387 H1_P_Z = 14.351949406500642 # Orientation: H1_DX_X = 0.10054466890406388 H1_DX_Y = -0.7943250274781803 H1_DX_Z = 0.5991147805527355 H1_DY_X = 0.6308843124652057 H1_DY_Y = 0.5165271003704106 H1_DY_Z = 0.5789514132189435 H1_DZ_X = -0.7693346176016362 H1_DZ_Y = 0.31976163826311677 H1_DZ_Z = 0.5530612451212136 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 59.95836654808536 H2_P_Y = 119.44130395599176 H2_P_Z = 1.0914994134039402 # Orientation: H2_DX_X = -0.9463988891786244 H2_DX_Y = -0.3228812289022045 H2_DX_Z = -0.008766674629668847 H2_DY_X = -0.20856512801890403 H2_DY_Y = 0.6316006700978676 H2_DY_Z = -0.7467135869303518 H2_DZ_X = 0.24663683815667525 H2_DZ_Y = -0.7048604865890269 H2_DZ_Z = -0.6650879374259837 ############# END of Description of junction: j4