#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS5HS6
FINGERPRINT = 160
LOOP_LENGTH_SUM = 11
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  226
S1_NAME_ID3 = 237
S1_NUM_ID5_ORIG =  226
S1_NUM_ID3_ORIG = 237
S1_NAME2_ID5 =  228
S1_NAME2_ID3 = 235
S1_NUM2_ID5_ORIG =  228
S1_NUM2_ID3_ORIG = 235
S1_SQ2 = CAAUACUC
S1_SQLEN2 = 8
S1_SQ = AGCAAUACUCGG
S1_SQLEN = 12
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  209
S2_NAME_ID3 = 219
S2_NUM_ID5_ORIG =  209
S2_NUM_ID3_ORIG = 219
S2_NAME2_ID5 =  211
S2_NAME2_ID3 = 217
S2_NUM2_ID5_ORIG =  211
S2_NUM2_ID3_ORIG = 217
S2_SQ2 = GUGCCAG
S2_SQLEN2 = 7
S2_SQ = CCGUGCCAGCU
S2_SQLEN = 11
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 228
H1_OUTID2_ORIG = 217
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 43.70120425209874
H1_P_Y = 14.037123402250362
H1_P_Z = 7.459656664597556
# Orientation:
H1_DX_X = -0.7750344630100869
H1_DX_Y = 0.35245033893702526
H1_DX_Z = -0.5245000855384498
H1_DY_X = 0.6267338301550112
H1_DY_Y = 0.5348353800941279
H1_DY_Z = -0.5667061163767322
H1_DZ_X = 0.08078543981369535
H1_DZ_Y = -0.7679387181167137
H1_DZ_Z = -0.6354084024714854
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 3
H2_OUTID2 = 10
H2_INID2_ORIG = 211
H2_OUTID2_ORIG = 235
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 38.890713024080185
H2_P_Y = 38.65615234803186
H2_P_Z = 31.69619571866349
# Orientation:
H2_DX_X = 0.887200326541695
H2_DX_Y = 0.30217017763092713
H2_DX_Z = -0.3486671254001408
H2_DY_X = -0.442223123836186
H2_DY_Y = 0.7724349311638719
H2_DY_Z = -0.45583219046315193
H2_DZ_X = 0.13158377304542057
H2_DZ_Y = 0.5586031336005561
H2_DZ_Z = 0.8189311630428833
#############  END of Description of junction: j1