#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS1
FINGERPRINT = 167
LOOP_LENGTH_SUM = 2
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  9
S1_NAME_ID3 = 15
S1_NUM_ID5_ORIG =  9
S1_NUM_ID3_ORIG = 15
S1_NAME2_ID5 =  11
S1_NAME2_ID3 = 13
S1_NUM2_ID5_ORIG =  11
S1_NUM2_ID3_ORIG = 13
S1_SQ2 = UAU
S1_SQLEN2 = 3
S1_SQ = UAUAUGC
S1_SQLEN = 7
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 12
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 12
S2_NAME2_ID5 =  8
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  8
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = AUA
S2_SQLEN2 = 3
S2_SQ = GCAUAUA
S2_SQLEN = 7
S2_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 11
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = D
# Position:
H1_P_X = -59.7756399890354
H1_P_Y = 38.33321156131545
H1_P_Z = 36.26249689312287
# Orientation:
H1_DX_X = 0.46161844926297846
H1_DX_Y = 0.18031571554023884
H1_DX_Z = 0.8685589502326536
H1_DY_X = 0.4584946536381622
H1_DY_Y = 0.7896998654252698
H1_DY_Z = -0.4076233250594754
H1_DZ_X = -0.7594017776416351
H1_DZ_Y = 0.5863960822486192
H1_DZ_Z = 0.28186623571865255
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 8
H2_OUTID2_ORIG = 13
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = -45.8793017765012
H2_P_Y = 23.06828845171589
H2_P_Z = 30.788342240134696
# Orientation:
H2_DX_X = -0.5992462772744531
H2_DX_Y = -0.6346059494431024
H2_DX_Z = 0.4880360520536655
H2_DY_X = -0.4415077745367455
H2_DY_Y = -0.24655511846216882
H2_DY_Z = -0.8627174848023671
H2_DZ_X = 0.6678134351720715
H2_DZ_Y = -0.7324519523433111
H2_DZ_Z = -0.13243622356498364
#############  END of Description of junction: j1