############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = HS6HS12HS12HS16 FINGERPRINT = 12:76:78:81:88:139 LOOP_LENGTH_SUM = 46 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 440 S1_NAME_ID3 = 461 S1_NUM_ID5_ORIG = 440 S1_NUM_ID3_ORIG = 461 S1_NAME2_ID5 = 442 S1_NAME2_ID3 = 459 S1_NUM2_ID5_ORIG = 442 S1_NUM2_ID3_ORIG = 459 S1_SQ2 = GACCGAUAGUGAACCAGU S1_SQLEN2 = 18 S1_SQ = CUGACCGAUAGUGAACCAGUAC S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 28 S2_NAME_ID3 = 39 S2_NUM_ID5_ORIG = 28 S2_NUM_ID3_ORIG = 39 S2_NAME2_ID5 = 30 S2_NAME2_ID3 = 37 S2_NUM2_ID5_ORIG = 30 S2_NUM2_ID3_ORIG = 37 S2_SQ2 = GCCCUGGC S2_SQLEN2 = 8 S2_SQ = AUGCCCUGGCAG S2_SQLEN = 12 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 468 S3_NAME_ID3 = 485 S3_NUM_ID5_ORIG = 468 S3_NUM_ID3_ORIG = 485 S3_NAME2_ID5 = 470 S3_NAME2_ID3 = 483 S3_NUM2_ID5_ORIG = 470 S3_NUM2_ID3_ORIG = 483 S3_SQ2 = AAAGGCGAAAAGAA S3_SQLEN2 = 14 S3_SQ = GGAAAGGCGAAAAGAACC S3_SQLEN = 18 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 495 S4_NAME_ID3 = 512 S4_NUM_ID5_ORIG = 495 S4_NUM_ID3_ORIG = 512 S4_NAME2_ID5 = 497 S4_NAME2_ID3 = 510 S4_NUM2_ID5_ORIG = 497 S4_NUM2_ID3_ORIG = 510 S4_SQ2 = AGUGAAAAAGAACC S4_SQLEN2 = 14 S4_SQ = GGAGUGAAAAAGAACCUG S4_SQLEN = 18 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 442 H1_OUTID2_ORIG = 37 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 58.18593225073628 H1_P_Y = -53.119028600273175 H1_P_Z = 14.377525006192581 # Orientation: H1_DX_X = -0.6165540227821182 H1_DX_Y = -0.5992749335856971 H1_DX_Z = -0.510617950102672 H1_DY_X = 0.6083608295891807 H1_DY_Y = -0.7743120118276963 H1_DY_Z = 0.17417809667381867 H1_DZ_X = -0.4997581795356183 H1_DZ_Y = -0.2032497535428135 H1_DZ_Z = 0.8419805815290697 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 470 H2_OUTID2_ORIG = 459 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 49.848830612097075 H2_P_Y = -23.31545713660692 H2_P_Z = 14.69329484068152 # Orientation: H2_DX_X = 0.44421987984326705 H2_DX_Y = 0.4000767907633289 H2_DX_Z = -0.8016278811546886 H2_DY_X = -0.8646359573211555 H2_DY_Y = -0.04293035350864116 H2_DY_Z = -0.5005613309625065 H2_DZ_X = -0.23467713919205124 H2_DZ_Y = 0.9154755847318583 H2_DZ_Z = 0.3268502625063867 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 497 H3_OUTID2_ORIG = 483 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 89.2847237565299 H3_P_Y = -15.36242132008245 H3_P_Z = -12.766926707799062 # Orientation: H3_DX_X = 0.9629843137580281 H3_DX_Y = 0.11808983479403956 H3_DX_Z = -0.2423138509749201 H3_DY_X = -0.26280619819327455 H3_DY_Y = 0.21137864360997582 H3_DY_Z = -0.9414095661383559 H3_DZ_X = -0.059950926991817255 H3_DZ_Y = 0.9702442269572771 H3_DZ_Z = 0.23458905858734447 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 18 H4_INID2 = 3 H4_OUTID2 = 16 H4_INID2_ORIG = 30 H4_OUTID2_ORIG = 510 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 65.93151482960283 H4_P_Y = -32.4651507904006 H4_P_Z = -18.250998276713723 # Orientation: H4_DX_X = 0.1280156359526785 H4_DX_Y = -0.8746130591138623 H4_DX_Z = -0.46761521978985243 H4_DY_X = -0.9786759250372512 H4_DY_Y = -0.18777185150460696 H4_DY_Z = 0.08327764126710235 H4_DZ_X = -0.16064068819608224 H4_DZ_Y = 0.44698291758189157 H4_DZ_Z = -0.8800004776622963 ############# END of Description of junction: j3