RNAJunction Database - Junction Profile:1092
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1092: 1I97_j2_A-A585_A-G611

Primary Citation: (from PDB entry 1I97)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1I97 j2 A-A585 A-G611 
NC-IUBMB Classification:HS7HS9Cluster Page
Angles: 148°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.87267Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCAUGUGAAAGACCA 15nt

Strand 2: Chain A: UGGGGGAGCGUGG 13nt

Valid XHTML 1.0 Transitional